Shawn,
The replacement cost estimates does seem a little high. I suggest you ask to see the agent's/underwriter's replacement cost estimate (the detailed report). Review the inputs (it's not rocket science) and check for accuracy.
The software used is likely from Marshall & Swift/Boeckh. It estimates the cost to rebuild, which is higher than new construction.
Trying to get coverage for less than 100% replacement cost is a challenge and not a good strategy.
If you insure for less than the 100% estimated reconstruction cost (of what you have) you'll likely get a coinsurance penalty on any partial losses.
It would be a challenge to get a policy customized to do what you want. You'll probably spend more time than premium savings would warrant, and the probability of it working the way you want in a claim is low.
Simpler to save premium with a higher deductible.
Claims experience shows its near impossible to salvage a foundation in a total loss (time and liability concerns for whomever is rebuilding on top of the old foundation). Ask for the endorsement to cover the foundations.